PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_17979
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 208aa    MW: 23368.4 Da    PI: 7.62
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_17979genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-19553153
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  +
  PEQU_17979  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 53
                59*******9.**********8.....334*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.28E-33564No hitNo description
SMARTSM003802.3E-37669IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-20664IPR016177DNA-binding domain
PROSITE profilePS5103221.878663IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-33663IPR001471AP2/ERF domain
PfamPF008477.2E-12650IPR001471AP2/ERF domain
PRINTSPR003671.2E-10718IPR001471AP2/ERF domain
PRINTSPR003671.2E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0010143Biological Processcutin biosynthetic process
GO:0010166Biological Processwax metabolic process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT  60
NFPVPATFAA ENGATFSSSL SEVLSAKLRR CCKTPSPSLT CLRLDTESSH IGVWQKRAGT  120
RADSNWVMTI KLDISTPQAH LESPTMPLPS PSPPFPTDPQ HQHQHQIMAV EKKEQEEEED  180
QDRIALQMIE ELLQRSSATP TCGSPLDH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-16264164ATERF1
3gcc_A2e-16264164ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008804592.13e-91PREDICTED: ethylene-responsive transcription factor WIN1-like
SwissprotQ9XI332e-72WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLA0A0K9PI603e-81A0A0K9PI60_Z
STRINGGSMUA_Achr9P28540_0013e-80(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37173876
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.15e-58ERF family protein